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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
accessible chromatin
817
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2398
February, 2021
1672
September, 2022
259
May, 2021
250
February, 2024
111
November, 2021
101
October, 2022
81
May, 2020
45
March, 2020
34
August, 2017
28
January, 2021
22
August, 2021
6
February, 2023
5
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2020
1
January, 2022
1
May, 2022
1
November, 2019
Available data
5020
bed bed3+
898
tsv
869
bed bed9
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
18
bigWig
7
bigBed narrowPeak
1
bam
Organism
5019
Homo sapiens
Biosample type
1962
cell line
1653
tissue
1114
primary cell
285
in vitro differentiated cells
4
stem cell
Organ
338
epithelium
267
brain
260
kidney
254
musculature of body
242
connective tissue
224
lung
207
intestine
178
bodily fluid
169
blood
166
embryo
155
limb
152
skin of body
147
heart
127
large intestine
127
vasculature
103
extraembryonic component
97
blood vessel
96
pancreas
85
stomach
77
liver
73
uterus
66
mammary gland
61
small intestine
58
prostate gland
55
bone element
52
placenta
51
penis
50
adrenal gland
47
ureter
46
lymph node
42
adipose tissue
39
eye
36
thymus
35
artery
32
gonad
29
esophagus
27
spinal cord
24
spleen
17
testis
16
lymphoid tissue
15
ovary
15
thyroid gland
15
vein
12
mouth
11
bronchus
11
nerve
11
pituitary gland
10
lymphatic vessel
9
bone marrow
8
breast
7
skeleton
6
tongue
6
urinary bladder
6
vagina
4
trachea
2
nose
Project
4877
AMP
111
ENCODE
31
T1D
1
ITG
Genome assembly (visualization)
5012
hg19
408
GRCh38
1
hg18
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
5020 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
MCF-7
9
6
2
3
+ See 743 more…
tissue
stomach
40
21
1
heart
37
20
1
1
2
brain
29
16
3
1
1
lung
33
17
muscle of arm
33
16
1
+ See 194 more…
primary cell
monocyte
2
86
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
+ See 263 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
neural progenitor cell
5
5
14
adipocyte
4
6
1
1
4
T-cell acute lymphoblastic leukemia
5
3
mesenchymal stem cell
3
3
1
1
+ See 91 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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