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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
151
September, 2022
127
November, 2021
111
February, 2021
62
September, 2023
60
February, 2024
29
March, 2023
25
June, 2020
20
January, 2021
17
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
August, 2021
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
February, 2020
1
November, 2019
Available data
547
bed bed3+
167
bigWig
90
tsv
50
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
696
Homo sapiens
Biosample type
584
primary cell
59
tissue
35
cell line
18
in vitro differentiated cells
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
478
AMP
127
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
599
hg19
225
GRCh38
annotation_type!
gene expression
BIOSAMPLE
TYPE
696 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
7
2
2
1
1
2
endothelial cell of umbilical vein
2
4
6
5
2
1
hepatocyte
8
3
1
1
1
2
4
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 128 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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