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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1653
candidate regulatory elements
1348
target gene predictions
973
histone modifications
935
chromatin state
854
accessible chromatin
811
binding sites
682
gene expression
168
eQTL
167
differential activity
138
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
283
June, 2020
218
November, 2021
63
January, 2020
54
May, 2020
48
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
22
November, 2022
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
February, 2023
1
June, 2021
Available data
844
bed bed3+
492
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
809
Homo sapiens
Biosample type
477
primary cell
161
cell line
153
tissue
63
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
588
AMP
218
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
846
hg19
386
GRCh38
organ_slims!
eye
BIOSAMPLE
TYPE
854 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 213 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 146 more…
tissue
kidney
10
islet of Langerhans
6
heart
5
pancreas
5
liver
4
+ See 92 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 29 more…
See all biosamples
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