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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1178
target gene predictions
977
histone modifications
939
chromatin state
864
accessible chromatin
811
binding sites
409
gene expression
162
eQTL
84
variant allelic effects
74
Fine-mapped variants
52
differential activity
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
833
September, 2022
35
August, 2017
34
May, 2022
9
May, 2019
8
April, 2019
6
January, 2020
5
May, 2021
5
October, 2019
3
May, 2020
1
November, 2019
Available data
869
bed bed9
40
bigBed bed9
34
bed bed9+
23
bed bed3+
2
bigWig
1
bam
Organism
939
Homo sapiens
Biosample type
506
tissue
197
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
50
limb
48
connective tissue
46
heart
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
939
AMP
Genome assembly (visualization)
939
hg19
864
GRCh38
BIOSAMPLE
TYPE
939 results
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chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 109 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 83 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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