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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1178
target gene predictions
977
histone modifications
939
chromatin state
864
accessible chromatin
811
binding sites
409
gene expression
162
eQTL
84
variant allelic effects
74
Fine-mapped variants
52
differential activity
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
834
September, 2022
139
May, 2021
111
November, 2021
44
March, 2020
28
January, 2021
18
May, 2020
2
February, 2021
1
January, 2020
1
January, 2022
Available data
1178
bed bed3+
3
bigBed narrowPeak
3
bigWig
Organism
1178
Homo sapiens
Biosample type
518
tissue
366
primary cell
231
cell line
61
in vitro differentiated cells
2
stem cell
Organ
122
epithelium
80
musculature of body
78
lung
76
connective tissue
75
kidney
73
brain
71
intestine
49
heart
49
limb
44
pancreas
44
skin of body
42
large intestine
36
extraembryonic component
33
embryo
31
vasculature
30
stomach
29
bodily fluid
27
blood
25
blood vessel
23
small intestine
21
adrenal gland
21
liver
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
spleen
7
ovary
7
uterus
6
thyroid gland
5
lymphoid tissue
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Project
1039
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
1178
hg19
111
GRCh38
BIOSAMPLE
TYPE
1178 results
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target gene predictions
tissue
stomach
21
heart
20
adrenal gland
17
lung
17
small intestine
17
+ See 111 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
+ See 168 more…
cell line
A549
19
pituitary stalk
10
K562
7
MCF-7
6
HeLa-S3
4
+ See 152 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
dendritic cell
6
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
+ See 23 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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