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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1072
target gene predictions
871
histone modifications
810
binding sites
513
accessible chromatin
124
variant allelic effects
75
chromatin state
39
eQTL
12
gene expression
6
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
other
2
variant to gene
Date released
2401
February, 2021
1672
September, 2022
288
June, 2020
201
May, 2021
127
May, 2020
100
February, 2024
99
October, 2022
56
January, 2021
45
March, 2020
43
May, 2022
41
August, 2021
41
November, 2022
35
August, 2017
25
February, 2023
19
April, 2020
5
September, 2023
4
January, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
February, 2020
1
January, 2022
1
June, 2021
1
November, 2019
1
October, 2019
Available data
5122
bed bed3+
164
bigWig
34
bed bed9+
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
5165
Homo sapiens
Biosample type
1955
cell line
1782
tissue
1146
primary cell
322
in vitro differentiated cells
4
stem cell
Organ
376
epithelium
288
brain
283
kidney
272
connective tissue
272
musculature of body
230
lung
207
intestine
164
bodily fluid
161
limb
155
blood
155
skin of body
141
heart
129
large intestine
129
pancreas
127
vasculature
125
embryo
109
extraembryonic component
95
blood vessel
92
eye
84
stomach
74
liver
67
mammary gland
63
prostate gland
62
bone element
60
small intestine
54
lymph node
54
penis
54
placenta
49
adipose tissue
48
ureter
47
adrenal gland
37
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
25
spleen
23
uterus
19
testis
17
lymphoid tissue
16
vein
15
ovary
15
thyroid gland
13
mouth
12
bronchus
12
nerve
11
bone marrow
11
lymphatic vessel
11
pituitary gland
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5130
AMP
57
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
6964
hg19
GRCh38
4
hg18
assembly!
GRCh38
BIOSAMPLE
TYPE
5211 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
eQTL
gene expression
caQTL
hQTL
meQTL
pQTL
sQTL
other
variant to gene
cell line
A549
21
19
1
2
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
neuroblastoma cell
8
4
+ See 753 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
2
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 201 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
3
CD14-positive monocyte
8
19
CD4-positive, alpha-beta memory T cell
14
9
+ See 270 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
embryonic stem cell
1
1
1
5
5
neural progenitor cell
5
5
1
mesenchymal stem cell
3
3
1
1
1
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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