Annotation Matrix – Common Metabolic Diseases Genome Atlas

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

BIOSAMPLE

	TYPE
6595 results Clear Filters	candidate regulatory elements	target gene predictions	histone modifications	chromatin state	binding sites	accessible chromatin	gene expression	eQTL	variant allelic effects	Fine-mapped variants	hQTL	sQTL	meQTL	other	variant to gene	caQTL	pQTL	representative DNase hypersensitivity sites
tissue
heart	37	20	1	21	1	4	3		2
stomach	40	21	1	19		3		1
kidney	29	14	2	16	1	9	7	1	1
brain	29	16	3	18	1	2	1	2	1
lung	33	17		16				1

cell line
A549	21	19	1	18	1	1
MCF-7	9	6	2	5	2	1
K562	7	7	1	7	1	1
EndoC_BH1		1	1		1	8	8		1
breast cancer cell			11		9

primary cell
monocyte		1	86		1	17	15	4			2	1	1
common myeloid progenitor, CD34-positive	27	14		13
CD8-positive, alpha-beta T cell	7	3	30	1		2	3
B cell	13	10		8		2	2
CD4-positive, alpha-beta memory T cell	14	9		9

in vitro differentiated cells
neural progenitor cell	5	5	15	4		10	7
hematopoietic multipotent progenitor cell	19	10	1	10	1	1	1
adipocyte	4	6	1	6	1	2	1
embryonic stem cell		1	1	5	1	5
cardiomyocytes							11

stem cell
H1-hESC				1
mesenchymal stem cell		1
mesendoderm		1