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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
245
gene expression
200
accessible chromatin
120
target gene predictions
99
candidate regulatory elements
89
differential activity
52
chromatin state
39
variant allelic effects
35
binding sites
22
histone modifications
3
eQTL
2
caQTL
Date released
182
February, 2021
155
September, 2023
148
September, 2022
127
November, 2021
76
February, 2024
36
March, 2023
23
August, 2021
22
June, 2020
20
January, 2021
19
May, 2021
15
November, 2022
13
January, 2020
13
May, 2020
11
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
Available data
516
bed bed3+
315
tsv
174
bigWig
78
txt
49
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
906
Homo sapiens
Biosample type
819
primary cell
61
tissue
cell line
26
in vitro differentiated cells
Organ
906
epithelium
611
kidney
427
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
597
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
568
hg19
231
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
906 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 146 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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