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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1178
target gene predictions
976
histone modifications
860
accessible chromatin
811
binding sites
23
chromatin state
13
caQTL
4
variant allelic effects
3
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2408
February, 2021
1678
September, 2022
333
November, 2021
288
June, 2020
285
May, 2021
101
October, 2022
72
May, 2020
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
31
February, 2023
22
August, 2017
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5549
bed bed3+
869
bed bed9
519
tsv
507
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
4
bam
4
bigBed narrowPeak
3
bed gappedPeak
3
xls
Organism
5503
Homo sapiens
Biosample type
1953
cell line
1786
tissue
1472
primary cell
333
in vitro differentiated cells
3
stem cell
Organ
479
epithelium
307
connective tissue
297
kidney
295
brain
266
musculature of body
237
lung
221
intestine
167
limb
163
skin of body
162
bodily fluid
157
heart
153
blood
140
vasculature
135
pancreas
133
large intestine
127
embryo
112
extraembryonic component
106
blood vessel
95
eye
91
stomach
82
liver
72
mammary gland
70
bone element
64
small intestine
62
prostate gland
56
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
46
adipose tissue
42
artery
38
thymus
37
gonad
31
esophagus
29
spinal cord
26
spleen
25
uterus
19
testis
17
lymphoid tissue
17
ovary
17
vein
16
thyroid gland
15
skeleton
14
lymphatic vessel
13
bronchus
13
mouth
12
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5137
AMP
333
ENCODE
59
T1D
19
LungMap
1
community
Genome assembly (visualization)
5541
hg19
593
GRCh38
1
hg18
BIOSAMPLE
TYPE
5549 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
chromatin state
caQTL
variant allelic effects
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
A549
21
19
1
1
2
MCF-7
9
6
2
1
3
breast cancer cell
11
9
K562
7
7
1
1
2
1
HepG2
2
3
5
2
3
+ See 752 more…
tissue
stomach
40
21
1
3
heart
37
20
1
4
1
kidney
29
14
2
9
1
1
brain
29
16
3
2
1
lung
33
17
+ See 203 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
13
10
6
CD14-positive monocyte
8
19
+ See 315 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
3
1
1
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
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