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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
976
histone modifications
903
accessible chromatin
817
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2407
February, 2021
844
September, 2022
288
June, 2020
222
November, 2021
146
May, 2021
119
February, 2024
117
May, 2020
101
October, 2022
65
January, 2020
52
August, 2021
41
November, 2022
34
August, 2017
31
February, 2023
28
January, 2021
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
1
March, 2020
Available data
4566
bed bed3+
898
tsv
869
bed bed9
543
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
13
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4520
Homo sapiens
Biosample type
1726
cell line
1332
tissue
1223
primary cell
282
in vitro differentiated cells
1
stem cell
Organ
425
epithelium
252
connective tissue
234
kidney
233
brain
201
musculature of body
161
lung
155
intestine
133
bodily fluid
132
vasculature
126
blood
126
limb
124
heart
121
skin of body
115
pancreas
98
blood vessel
94
embryo
93
large intestine
89
eye
80
liver
76
extraembryonic component
63
stomach
54
bone element
54
mammary gland
48
prostate gland
45
lymph node
43
penis
41
small intestine
39
placenta
38
artery
38
ureter
36
adipose tissue
36
adrenal gland
26
gonad
24
thymus
23
esophagus
20
spinal cord
18
spleen
18
uterus
15
testis
13
vein
12
lymphoid tissue
12
skeleton
11
bronchus
11
lymphatic vessel
11
nerve
11
thyroid gland
10
ovary
9
mouth
8
bone marrow
6
breast
5
tongue
5
trachea
4
urinary bladder
4
vagina
2
nose
1
pituitary gland
Project
4292
AMP
222
ENCODE
32
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4558
hg19
515
GRCh38
1
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
4566 results
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Clear Filters
candidate regulatory elements
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
A549
21
1
1
2
breast cancer cell
11
9
MCF-7
9
2
1
3
HepG2
2
5
2
3
1
K562
7
1
1
2
1
+ See 750 more…
tissue
heart
37
1
5
1
2
kidney
29
2
10
1
1
1
stomach
40
1
3
brain
29
3
2
1
1
muscle of arm
33
1
1
+ See 211 more…
primary cell
monocyte
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
30
4
common myeloid progenitor, CD34-positive
27
endothelial cell
1
15
2
2
2
1
fibroblast
16
1
6
+ See 317 more…
in vitro differentiated cells
neural progenitor cell
5
14
10
hematopoietic multipotent progenitor cell
19
1
1
1
adipocyte
4
1
4
1
4
T-cell acute lymphoblastic leukemia
5
3
neuroblastoma cell line
6
2
+ See 95 more…
stem cell
H1-hESC
1
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