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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1356
target gene predictions
976
histone modifications
838
accessible chromatin
817
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5857
bed bed3+
881
tsv
863
bed bed9
481
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5811
Homo sapiens
Biosample type
2124
cell line
1809
tissue
1574
primary cell
344
in vitro differentiated cells
4
stem cell
Organ
535
epithelium
321
connective tissue
295
kidney
291
brain
276
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
169
limb
165
skin of body
164
heart
156
pancreas
153
vasculature
137
large intestine
118
blood vessel
112
extraembryonic component
99
liver
96
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
46
adipose tissue
44
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
13
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5444
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5849
hg19
738
GRCh38
1
hg18
month_released!
January, 2020
BIOSAMPLE
TYPE
5857 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 760 more…
tissue
stomach
40
21
1
3
heart
37
20
1
3
1
2
kidney
29
14
2
8
1
1
1
brain
29
16
3
1
1
1
lung
33
17
+ See 216 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 329 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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