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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
903
accessible chromatin
726
binding sites
121
variant allelic effects
40
chromatin state
10
eQTL
6
caQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5822
bed bed3+
898
tsv
869
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5776
Homo sapiens
Biosample type
2055
cell line
1850
tissue
1564
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
541
epithelium
318
connective tissue
307
kidney
303
brain
278
musculature of body
235
lung
227
intestine
177
embryo
175
limb
173
heart
171
bodily fluid
162
blood
161
skin of body
159
pancreas
159
vasculature
136
large intestine
121
blood vessel
111
extraembryonic component
100
liver
96
eye
93
stomach
75
uterus
70
mammary gland
69
bone element
64
small intestine
63
prostate gland
57
adrenal gland
55
placenta
52
lymph node
52
penis
51
ureter
49
adipose tissue
45
artery
38
thymus
36
gonad
33
esophagus
28
spinal cord
26
spleen
18
lymphoid tissue
18
testis
17
ovary
17
thyroid gland
16
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5411
AMP
333
ENCODE
58
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5816
hg19
798
GRCh38
1
hg18
month_released!
October, 2022
BIOSAMPLE
TYPE
5822 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
A549
21
19
1
1
1
H1-hESC
1
39
1
1
1
K562
7
23
1
1
1
1
MCF-7
9
6
2
1
2
+ See 758 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 217 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
1
+ See 329 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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