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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
97
target gene predictions
76
candidate regulatory elements
38
chromatin state
23
gene expression
19
accessible chromatin
15
binding sites
13
eQTL
12
histone modifications
6
Fine-mapped variants
3
variant allelic effects
2
differential activity
Date released
105
September, 2022
76
February, 2021
53
February, 2024
14
August, 2021
11
June, 2020
10
May, 2021
9
March, 2020
5
February, 2020
4
January, 2020
3
August, 2017
3
January, 2022
3
May, 2020
2
November, 2021
2
September, 2018
1
January, 2018
1
November, 2022
1
October, 2022
Available data
227
bed bed3+
35
bed bed9
32
tsv
7
bigWig
1
bigBed bed9
Organism
304
Homo sapiens
Biosample type
130
cell line
119
tissue
31
in vitro differentiated cells
23
primary cell
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
302
AMP
2
ENCODE
Genome assembly (visualization)
274
hg19
103
GRCh38
2
hg18
BIOSAMPLE
TYPE
304 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
gene expression
accessible chromatin
binding sites
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
cell line
H1-hESC
39
1
1
8
1
2
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 16 more…
tissue
adipose tissue
8
7
6
3
2
1
4
1
subcutaneous adipose tissue
2
1
5
2
6
3
1
1
omental fat pad
2
5
2
2
2
2
3
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
+ See 9 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
primary cell
trophoblast cell
5
7
4
1
1
primordial germ cell
1
1
mesenchymal stem cell of adipose
1
placental hematopoietic stem cell
1
trophoblast giant cell
1
stem cell
H1-hESC
1
See all biosamples
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