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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
target gene predictions
100
candidate regulatory elements
58
binding sites
53
chromatin state
35
histone modifications
24
accessible chromatin
11
gene expression
2
eQTL
Date released
150
September, 2022
123
February, 2021
79
February, 2024
22
June, 2020
20
October, 2022
11
May, 2021
10
August, 2021
3
August, 2017
2
November, 2021
1
March, 2020
1
March, 2024
Available data
359
bed bed3+
50
bed bed9
11
tsv
2
bigWig
Organism
422
Homo sapiens
Biosample type
322
cell line
38
tissue
31
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
420
AMP
2
ENCODE
Genome assembly (visualization)
411
hg19
131
GRCh38
BIOSAMPLE
TYPE
422 results
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target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
cell line
H1-hESC
39
1
2
1
1
1
8
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
H9
8
7
1
GM06990
1
2
2
1
1
1
+ See 42 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
1
2
1
embryonic facial prominence
1
1
1
1
blood
2
first pancreatic bud
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
primordial germ cell
1
1
placental hematopoietic stem cell
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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