Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
122
candidate regulatory elements
101
target gene predictions
64
binding sites
62
chromatin state
38
histone modifications
25
accessible chromatin
5
eQTL
3
gene expression
1
pQTL
1
variant allelic effects
Date released
177
September, 2022
142
February, 2021
29
February, 2024
23
October, 2022
20
June, 2020
10
November, 2021
9
May, 2021
3
August, 2017
3
August, 2021
3
January, 2022
3
March, 2024
Available data
355
bed bed3+
59
bed bed9
5
bigWig
3
tsv
Organism
422
Homo sapiens
Biosample type
275
cell line
109
primary cell
29
tissue
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
412
AMP
10
ENCODE
Genome assembly (visualization)
416
hg19
100
GRCh38
BIOSAMPLE
TYPE
422 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
variant allelic effects
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 46 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
1
3
2
2
1
foreskin fibroblast
6
2
4
1
2
1
fibroblast of dermis
4
4
1
3
dermis blood vessel endothelial cell
6
2
2
+ See 10 more…
tissue
lower leg skin
6
2
2
skin of body
1
1
1
3
suprapubic skin
3
blood
2
skin of forearm
1
1
+ See 5 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download