Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
80
candidate regulatory elements
target gene predictions
49
gene expression
48
chromatin state
31
binding sites
25
histone modifications
19
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
109
February, 2021
80
September, 2022
32
November, 2021
20
June, 2020
18
February, 2024
15
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
9
February, 2020
9
May, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
6
March, 2020
3
April, 2020
3
May, 2021
3
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
June, 2021
Available data
252
bed bed3+
63
tsv
55
bigWig
41
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
380
Homo sapiens
Biosample type
231
primary cell
83
tissue
38
in vitro differentiated cells
28
cell line
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
325
AMP
32
ENCODE
15
KPMP
4
ITG
3
LungMap
1
T1D
Genome assembly (visualization)
309
hg19
104
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
380 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
1
2
6
osteoblast
5
2
2
1
3
2
foreskin fibroblast
1
6
1
4
2
fibroblast of lung
6
4
2
pericyte cell
10
1
1
+ See 42 more…
tissue
adipose tissue
2
7
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
5
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 4 more…
in vitro differentiated cells
adipocyte
4
4
1
6
1
1
mesenchymal stem cell
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 5 more…
cell line
GM23248
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
See all biosamples
Download