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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
candidate regulatory elements
33
target gene predictions
28
chromatin state
13
binding sites
12
accessible chromatin
11
histone modifications
10
gene expression
Date released
81
September, 2022
53
February, 2021
10
June, 2020
8
August, 2021
7
May, 2021
2
November, 2021
1
August, 2017
1
March, 2020
1
October, 2022
Available data
127
bed bed3+
27
bed bed9
10
tsv
2
bigWig
Organism
164
Homo sapiens
Biosample type
76
cell line
35
tissue
30
in vitro differentiated cells
22
primary cell
1
stem cell
Organ
719
epithelium
509
kidney
461
brain
429
connective tissue
358
musculature of body
309
lung
280
intestine
255
pancreas
249
heart
243
limb
213
vasculature
201
skin of body
189
bodily fluid
178
blood
169
large intestine
168
blood vessel
164
embryo
146
extraembryonic component
127
liver
115
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
76
prostate gland
73
placenta
71
adrenal gland
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
spinal cord
41
esophagus
33
spleen
30
uterus
25
nerve
25
testis
22
lymphoid tissue
22
ovary
22
vein
21
thyroid gland
18
mouth
18
skeleton
16
lymphatic vessel
15
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
162
AMP
2
ENCODE
Genome assembly (visualization)
154
hg19
29
GRCh38
BIOSAMPLE
TYPE
164 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
cell line
H1-hESC
1
2
1
2
1
1
8
H9
7
2
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
H4
2
1
1
1
+ See 14 more…
tissue
chorionic villus
8
4
4
trophoblast
4
3
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
cardiogenic mesoderm
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
7
5
4
1
1
primordial germ cell
1
1
placental hematopoietic stem cell
1
trophoblast giant cell
1
stem cell
H1-hESC
1
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