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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
95
target gene predictions
74
candidate regulatory elements
36
chromatin state
17
accessible chromatin
16
binding sites
12
gene expression
12
histone modifications
3
eQTL
Date released
105
September, 2022
65
February, 2021
51
February, 2024
14
June, 2020
8
August, 2021
8
May, 2021
4
November, 2021
3
January, 2022
2
March, 2020
2
March, 2024
2
October, 2022
1
August, 2017
Available data
215
bed bed3+
35
bed bed9
12
tsv
3
bigWig
Organism
265
Homo sapiens
Biosample type
134
cell line
74
tissue
30
in vitro differentiated cells
26
primary cell
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
261
AMP
4
ENCODE
Genome assembly (visualization)
250
hg19
93
GRCh38
BIOSAMPLE
TYPE
265 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
cell line
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 16 more…
tissue
ovary
6
8
4
1
1
1
testis
3
7
3
1
1
1
1
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
+ See 3 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
luteal cell
1
1
primordial germ cell
1
1
Leydig cell
1
placental hematopoietic stem cell
1
+ See 2 more…
stem cell
H1-hESC
1
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