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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
132
candidate regulatory elements
128
target gene predictions
63
chromatin state
31
binding sites
25
accessible chromatin
24
histone modifications
12
gene expression
3
eQTL
1
variant allelic effects
Date released
183
September, 2022
121
February, 2021
52
February, 2024
18
June, 2020
12
May, 2021
12
November, 2021
8
August, 2021
5
October, 2022
3
January, 2022
2
August, 2017
2
March, 2024
1
March, 2020
Available data
343
bed bed3+
61
bed bed9
12
tsv
7
bigWig
Organism
419
Homo sapiens
Biosample type
197
cell line
122
primary cell
60
tissue
39
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
407
AMP
12
ENCODE
Genome assembly (visualization)
404
hg19
127
GRCh38
BIOSAMPLE
TYPE
419 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
cell line
H1-hESC
1
39
1
2
1
1
8
H9
7
8
1
GM23248
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 34 more…
primary cell
foreskin keratinocyte
11
4
4
trophoblast cell
7
5
4
1
1
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
1
2
fibroblast of dermis
4
4
3
1
+ See 12 more…
tissue
chorionic villus
8
4
4
trophoblast
4
3
2
1
1
lower leg skin
6
2
2
skin of body
1
1
1
3
embryonic facial prominence
1
1
1
1
+ See 8 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 7 more…
stem cell
H1-hESC
1
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