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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
187
accessible chromatin
142
gene expression
122
target gene predictions
100
candidate regulatory elements
53
chromatin state
38
binding sites
30
differential activity
29
histone modifications
15
variant allelic effects
2
caQTL
1
eQTL
Date released
198
February, 2021
151
September, 2022
127
November, 2021
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
May, 2022
2
November, 2019
1
July, 2020
Available data
479
bed bed3+
152
tsv
143
bigWig
78
txt
50
bed bed9
3
bam
3
bed gappedPeak
3
bigBed narrowPeak
3
xls
2
bigBed bed9
Organism
719
Homo sapiens
Biosample type
605
primary cell
49
tissue
45
cell line
20
in vitro differentiated cells
Organ
719
epithelium
509
kidney
461
brain
429
connective tissue
358
musculature of body
309
lung
280
intestine
255
pancreas
249
heart
243
limb
213
vasculature
201
skin of body
189
bodily fluid
178
blood
169
large intestine
168
blood vessel
164
embryo
146
extraembryonic component
127
liver
115
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
76
prostate gland
73
placenta
71
adrenal gland
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
spinal cord
41
esophagus
33
spleen
30
uterus
25
nerve
25
testis
22
lymphoid tissue
22
ovary
22
vein
21
thyroid gland
18
mouth
18
skeleton
16
lymphatic vessel
15
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
563
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
542
hg19
203
GRCh38
BIOSAMPLE
TYPE
719 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
caQTL
eQTL
primary cell
endothelial cell
14
8
7
2
1
2
epithelial cell of proximal tubule
1
16
1
2
1
1
1
hepatocyte
3
8
3
1
1
1
4
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 113 more…
tissue
pigmented layer of retina
19
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
corneal epithelium
1
+ See 5 more…
cell line
EndoC_BH1
8
8
1
1
3
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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