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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
candidate regulatory elements
69
accessible chromatin
53
target gene predictions
45
chromatin state
12
binding sites
9
histone modifications
3
eQTL
3
gene expression
2
variant allelic effects
Date released
125
September, 2022
63
February, 2021
24
February, 2023
22
November, 2022
13
June, 2020
10
November, 2021
5
May, 2021
4
February, 2024
3
August, 2017
3
October, 2022
2
February, 2020
2
January, 2020
2
January, 2022
2
March, 2024
2
May, 2020
1
March, 2020
Available data
235
bed bed3+
42
bed bed9
39
bigWig
4
tsv
Organism
283
Homo sapiens
Biosample type
204
tissue
44
cell line
29
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
273
AMP
10
ENCODE
Genome assembly (visualization)
277
hg19
59
GRCh38
BIOSAMPLE
TYPE
283 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
large intestine
27
1
14
13
1
retina
6
23
3
3
1
1
1
1
1
sigmoid colon
10
1
7
5
pigmented layer of retina
20
transverse colon
8
1
5
4
1
+ See 11 more…
cell line
HT-29
2
1
2
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 6 more…
primary cell
retinal pigment epithelial cell
2
3
1
1
2
1
colon epithelial cell
3
3
iris pigment epithelial cell
2
1
1
1
fibroblast of the conjunctiva
2
1
1
Muller cell
2
+ See 2 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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