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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
gene expression
37
target gene predictions
33
differential activity
32
accessible chromatin
24
candidate regulatory elements
11
variant allelic effects
10
eQTL
6
histone modifications
5
binding sites
4
chromatin state
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
47
March, 2023
33
May, 2021
31
February, 2021
30
September, 2022
20
January, 2021
16
February, 2024
8
August, 2021
7
August, 2018
6
March, 2020
4
June, 2020
4
May, 2020
3
August, 2017
2
January, 2020
1
April, 2019
1
February, 2020
1
February, 2023
1
January, 2018
1
June, 2021
Available data
119
bed bed3+
72
tsv
24
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
216
Homo sapiens
Biosample type
103
primary cell
80
tissue
30
cell line
3
in vitro differentiated cells
Organ
715
epithelium
547
kidney
336
connective tissue
314
brain
279
musculature of body
231
lung
216
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
194
AMP
20
T1D
2
community
Genome assembly (visualization)
186
hg19
GRCh38
assembly!
GRCh38
BIOSAMPLE
TYPE
216 results
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Clear Filters
gene expression
target gene predictions
differential activity
accessible chromatin
candidate regulatory elements
variant allelic effects
eQTL
histone modifications
binding sites
chromatin state
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
2
3
3
1
2
1
pancreatic alpha cell
3
3
3
4
1
pancreatic beta cell
3
3
3
4
1
pancreatic delta cell
3
3
3
4
1
pancreatic acinar cell
3
2
3
2
1
+ See 11 more…
tissue
islet of Langerhans
11
1
2
1
10
1
2
3
2
2
2
body of pancreas
2
5
8
1
pancreas
5
2
5
1
1
1
1
endocrine pancreas
4
7
cell line
EndoC_BH1
8
1
3
7
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
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