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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
candidate regulatory elements
59
target gene predictions
48
chromatin state
26
binding sites
20
histone modifications
18
accessible chromatin
4
eQTL
3
gene expression
2
variant allelic effects
Date released
141
September, 2022
97
February, 2021
13
June, 2020
10
November, 2021
7
May, 2021
4
January, 2022
4
October, 2022
3
March, 2024
2
February, 2024
1
August, 2017
Available data
228
bed bed3+
47
bed bed9
5
bigWig
3
tsv
Organism
282
Homo sapiens
Biosample type
123
cell line
110
primary cell
40
tissue
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
272
AMP
10
ENCODE
Genome assembly (visualization)
275
hg19
61
GRCh38
BIOSAMPLE
TYPE
282 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
cell line
22Rv1
4
2
2
1
1
GM23248
2
1
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 25 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
2
1
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 10 more…
tissue
prostate gland
4
2
2
2
2
1
1
lower leg skin
6
2
2
skin of body
1
1
1
3
suprapubic skin
3
skin of forearm
1
1
+ See 4 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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