Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
70
single cell RNA-seq
Assay category
201
Transcription
129
DNA binding
123
DNA accessibility
53
DNA methylation
8
3D chromatin structure
Date released
39
February, 2023
33
April, 2018
33
July, 2018
26
February, 2021
26
September, 2018
16
September, 2020
6
May, 2021
5
December, 2019
5
July, 2019
3
August, 2018
3
October, 2019
2
March, 2020
2
October, 2018
1
June, 2018
1
November, 2019
Available data
148
tsv
147
fastq
146
bam
146
bigWig
Organism
201
Homo sapiens
Biosample type
163
primary cell
34
cell line
2
in vitro differentiated cells
2
tissue
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
146
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
146
GRCh38
146
hg19
Lab
148
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
35
inconsistent ontology term
BIOSAMPLE
ASSAY
201 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 11 more…
cell line
EndoC_BH1
33
glomerular visceral epithelial cell
1
in vitro differentiated cells
endothelial cell
1
intermediate endothelial cell
1
tissue
pigmented layer of retina
2
See all biosamples
Download