Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1871ChIP-seq
  • 1527total RNA-seq
  • 531ATAC-seq
  • 369single cell RNA-seq
  • 212DNase-seq
  • 87RNA microarray
  • 85snATAC-seq
  • 75WGBS
  • 57pCHi-C
  • 34Hi-C
  • 21RRBS
  • 18small RNA-seq
  • 10MeRIP-seq
  • 5FAIRE-seq
  • 5GRO-seq
  • 5STARR-seq
  • 4Capture-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 3snDrop-seq
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1CRISPRi RNA-seq
  • 1DNAme array
  • 1MPRA
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 18Transcription
Date released
  • 18July, 2019
  • 1February, 2023
Available data
  • 18bam
  • 18bigWig
  • 18tsv
Organism
  • 18Homo sapiens
Biosample type
  • 16tissue
  • 2primary cell
  • 1cell line
Organ
  • 4brain
  • 3adipose tissue
  • 3connective tissue
  • 3liver
  • 3pancreas
  • 2musculature of body
  • 1epithelium
  • 1heart
  • 1kidney
Project
  • 19AMP
Genome assembly (visualization)
  • 18GRCh38
  • 18hg19
Lab
  • 19AMP-T2D consortium
BIOSAMPLE
ASSAY

19 results

search-icontable-tab-icon
Clear Filters
small RNA-seq
CRISPR genome editing followed by sgRNA sequencing
tissue
body of pancreas2
right lobe of liver2
cerebellum (Hemisphere)1
diencephalon1
frontal cortex1
primary cell
mesenchymal stem cell of adipose1
skeletal muscle satellite cell1
cell line
EndoC_BH11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego