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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
484
ChIP-seq
113
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
5
August, 2021
4
March, 2020
1
February, 2021
1
May, 2020
Available data
5
tsv
1
bed bed3+
Organism
11
Homo sapiens
Biosample type
25
tissue
17
primary cell
11
cell line
5
in vitro differentiated cells
4
stem cell
Organ
4
kidney
4
liver
1
mammary gland
Project
11
AMP
Genome assembly (visualization)
1
hg19
Lab
6
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
11 results
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pCHi-C
STARR-seq
cell line
HepG2
2
2
HEK293T
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
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