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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1305ChIP-seq
  • 1279total RNA-seq
  • 261ATAC-seq
  • 186DNase-seq
  • 106single cell RNA-seq
  • 27Hi-C
  • 19RRBS
  • 18small RNA-seq
  • 5FAIRE-seq
  • 4pCHi-C
  • 2Capture-C
  • 1snATAC-seq
Assay category
  • 1DNA accessibility
Date released
  • 2February, 2021
  • 2March, 2020
  • 1May, 2022
Available data
  • 3bed bed3+
  • 2bedpe bed3+
  • 2ibed
  • 1bam
  • 1txt
Organism
  • 5Homo sapiens
Biosample type
  • 2in vitro differentiated cells
  • 1cell line
  • 1primary cell
  • 1tissue
Organ
  • 1connective tissue
  • 1liver
  • 1musculature of body
Project
  • 5AMP
Genome assembly (visualization)
  • 5hg19
Lab
  • 5AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
  • 1audit script error
BIOSAMPLE
ASSAY

5 results

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pCHi-C
snATAC-seq
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)1
lymphocyte of B lineage (iPSC)1
cell line
HepG21
primary cell
osteoblast1
tissue
skeletal muscle tissue1
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