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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 29snATAC-seq
  • 7single cell RNA-seq
  • 4Hi-C
  • 2RNA microarray
Assay category
  • 29DNA accessibility
  • 43D chromatin structure
Date released
  • 27February, 2021
  • 3October, 2022
  • 1August, 2022
  • 1May, 2022
  • 1October, 2019
Available data
  • 27fastq
  • 4hic
  • 3bedpe bed3+
  • 3cool
  • 1bed bed3+
  • 1txt
Organism
  • 33Homo sapiens
Biosample type
  • 31primary cell
  • 2tissue
Organ
  • 4epithelium
  • 4pancreas
  • 1blood vessel
  • 1musculature of body
  • 1vasculature
  • 1vein
Project
  • 30HPAP
  • 3AMP
Genome assembly (visualization)
  • 5hg19
Lab
  • 30Klaus Kaestner, Upenn
  • 3AMP-T2D consortium
Audit category:
  • 33audit script error
  • 5inconsistent ontology term
BIOSAMPLE
ASSAY

33 results

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snATAC-seq
Hi-C
primary cell
Langerhans cell27
endothelial cell of umbilical vein1
pancreatic acinar cell1
pancreatic alpha cell1
pancreatic beta cell1
tissue
islet of Langerhans1
skeletal muscle tissue1
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