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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 204DNase-seq
  • 53ChIP-seq
  • 5Hi-C
  • 4ATAC-seq
  • 2Capture-C
  • 2pCHi-C
  • 2snATAC-seq
  • 2total RNA-seq
Assay category
  • 206DNA accessibility
Date released
  • 187June, 2019
  • 9November, 2018
  • 7October, 2019
  • 1July, 2025
  • 1May, 2022
  • 1November, 2020
Available data
  • 209bam
  • 209bed narrowPeak
  • 209bigBed narrowPeak
  • 209bigWig
  • 206bed bed3+
  • 206bed broadPeak
  • 206bigBed broadPeak
  • 39fastq
  • 21zippedFastqFolder
  • 1tbi
  • 1tsv
  • 1txt
Organism
  • 205Homo sapiens
Biosample type
  • 178tissue
  • 27primary cell
  • 1cell line
Organ
  • 78kidney
  • 36limb
  • 35musculature of body
  • 32brain
  • 30heart
  • 18ureter
  • 16epithelium
  • 11vasculature
  • 9blood vessel
  • 8connective tissue
  • 7pancreas
  • 5liver
  • 4artery
  • 4eye
  • 2adipose tissue
  • 2nerve
  • 2vein
  • 1spleen
Project
  • 206AMP
Genome assembly (visualization)
  • 205GRCh38
  • 182hg19
Lab
  • 205AMP-T2D consortium
  • 1Stephen Parker, UMich
Audit category:
  • 4inconsistent ontology term
  • 1audit script error
BIOSAMPLE
ASSAY

206 results

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Clear Filters
DNase-seq
snATAC-seq
tissue
heart18
muscle of arm17
brain14
kidney13
muscle of leg13
primary cell
cardiac fibroblast3
endothelial cell of umbilical vein2
glomerular visceral epithelial cell2
kidney tubule cell2
astrocyte of the cerebellum1
cell line
Panc11
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