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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1659ChIP-seq
  • 1241total RNA-seq
  • 343ATAC-seq
  • 217single cell RNA-seq
  • 212DNase-seq
  • 87RNA microarray
  • 40pCHi-C
  • 28WGBS
  • 26Hi-C
  • 21RRBS
  • 18small RNA-seq
  • 5FAIRE-seq
  • 5GRO-seq
  • 3snDrop-seq
  • 2Capture-C
  • 2snATAC-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1DNAme array
  • 1MPRA
Assay category
  • 2DNA accessibility
Date released
  • 1August, 2022
  • 1February, 2023
  • 1May, 2022
Available data
  • 1bed bed3+
  • 1txt
Organism
  • 2Homo sapiens
Biosample type
  • 2tissue
  • 1cell line
Organ
  • 2pancreas
  • 1epithelium
  • 1musculature of body
Project
  • LungMap
  • 3AMP
Genome assembly (visualization)
  • 1hg19
Lab
  • 48Klaus Kaestner, Upenn
  • 18Kyle Gaulton, UCSD
  • 6Katalin Susztak, Upenn
  • 3AMP-T2D consortium
  • 0Xin Sun, UCSD
Audit category:
  • 2audit script error
award.project!
  • LungMap
BIOSAMPLE
ASSAY

3 results

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snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
tissue
islet of Langerhans1
skeletal muscle tissue1
cell line
EndoC_BH11
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