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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1659ChIP-seq
  • 1241total RNA-seq
  • 343ATAC-seq
  • 217single cell RNA-seq
  • 212DNase-seq
  • 87RNA microarray
  • 40pCHi-C
  • 28WGBS
  • 26Hi-C
  • 21RRBS
  • 18small RNA-seq
  • 5FAIRE-seq
  • 5GRO-seq
  • 3snDrop-seq
  • 2Capture-C
  • 2snATAC-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1DNAme array
  • 1MPRA
Assay category
  • 2DNA accessibility
Date released
  • 84February, 2021
  • 2December, 2019
  • 1August, 2021
  • 1August, 2022
  • 1May, 2022
Available data
  • 85txt
  • 2tsv
  • 1bed bed3+
Organism
  • 88Homo sapiens
Biosample type
  • 89tissue
Organ
  • 84bone element
  • 2kidney
  • 1adipose tissue
  • 1connective tissue
  • 1epithelium
  • 1musculature of body
  • 1pancreas
Project
  • 89AMP
  • LungMap
Genome assembly (visualization)
  • 1hg19
Lab
  • 89AMP-T2D consortium
  • 48Klaus Kaestner, Upenn
  • 18Kyle Gaulton, UCSD
  • 6Katalin Susztak, Upenn
  • 0Xin Sun, UCSD
Audit category:
  • 84inconsistent ontology term
  • 4audit script error
award.project!
  • LungMap
BIOSAMPLE
ASSAY

89 results

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RNA microarray
snATAC-seq
tissue
bone element84
islet of Langerhans1
kidney interstitium1
renal glomerulus1
skeletal muscle tissue1
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