Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1305
ChIP-seq
1285
total RNA-seq
261
ATAC-seq
186
DNase-seq
100
single cell RNA-seq
27
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
Assay category
186
DNA accessibility
Date released
164
June, 2019
9
November, 2018
8
October, 2019
4
August, 2017
1
November, 2020
Available data
186
bam
186
bed narrowPeak
186
bigBed narrowPeak
186
bigWig
183
bed broadPeak
183
bigBed broadPeak
181
bed bed3+
12
fastq
Organism
186
Homo sapiens
Biosample type
161
tissue
22
primary cell
2
cell line
1
in vitro differentiated cells
Organ
72
kidney
36
limb
33
musculature of body
27
heart
22
brain
18
ureter
11
epithelium
10
vasculature
8
blood vessel
8
connective tissue
6
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
186
AMP
Genome assembly (visualization)
207
GRCh38
186
hg19
Lab
186
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
186 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
muscle of arm
17
heart
16
brain
14
kidney
13
muscle of leg
13
+ See 29 more…
primary cell
cardiac fibroblast
2
endothelial cell of umbilical vein
2
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 14 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
1
See all biosamples
Download