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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 29snATAC-seq
  • 7single cell RNA-seq
  • 2RNA microarray
  • 1Hi-C
Assay category
  • 29DNA accessibility
  • 7Transcription
  • 13D chromatin structure
Date released
  • 32February, 2021
  • 4December, 2019
  • 1August, 2022
  • 1May, 2022
  • 1October, 2019
Available data
  • 27fastq
  • 9tsv
  • 6txt
  • 5csv
  • 1bed bed3+
  • 1hic
Organism
  • 39Homo sapiens
Biosample type
  • 28primary cell
  • 9tissue
  • 2in vitro differentiated cells
Organ
  • 7kidney
  • 2epithelium
  • 1blood vessel
  • 1musculature of body
  • 1pancreas
  • 1vasculature
  • 1vein
Project
  • 27HPAP
  • 12AMP
Genome assembly (visualization)
  • 2hg19
Lab
  • 27Klaus Kaestner, Upenn
  • 12AMP-T2D consortium
Audit category:
  • 358inconsistent ontology term
  • 39audit script error
  • 28inconsistent control
  • 1inconsistent replicate
BIOSAMPLE
ASSAY

39 results

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Clear Filters
snATAC-seq
single cell RNA-seq
RNA microarray
Hi-C
primary cell
Langerhans cell27
endothelial cell of umbilical vein1
tissue
kidney5
islet of Langerhans1
kidney interstitium1
renal glomerulus1
skeletal muscle tissue1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
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