Experiment Matrix

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BIOSAMPLE

	ASSAY
1056 results Clear Filters	ChIP-seq	total RNA-seq	ATAC-seq	pCHi-C	Hi-C	MeRIP-seq	STARR-seq	Capture-C	GRO-seq	CRISPR genome editing followed by DNA sequencing	DNase-seq	HiChIP	single cell RNA-seq	CRISPR genome editing followed by sgRNA sequencing	MPRA	WGBS	shRNA RNA-seq	siRNA RNA-seq	whole genome sequencing assay
cell line
HepG2	378	14	1	2	2		2									1			1
EndoC_BH1	15	33	19		1	6		2		3		2		1
smooth muscle cell of the coronary artery	6	52	8
GM12878	60		1
Panc1	13				1						1
H1-hESC		8
RCC 7860 HIF1a re-expression	4	1
RCC 7860 vector	3	1		1
RCC 7860 HIF2a over-expression	3	1
EndoC-BH1																	1	1
HEK293T							2
early embryonic cell		2
glomerular visceral epithelial cell		1									1
iPSC derived cell line	2
MCF-7				1
MIN6															1
RCC 7860 VHL				1
Synthesized DNA							1
fibroblast cell line				1
in vitro differentiated cells
adipocyte	67	5	8					1			1
cardiomyocytes	3	59
embryonic stem cell	40	7	6	1
neural progenitor cell	21	7	10
pancreatic endoderm	18	4							1
cardiac precursors (cardiac muscle cell)		19	1		1
hepatocyte	15
definitive endodermal cell	8	2							1
primitive gut cell	8	2							1
cardiomyocytes (cardiac muscle cell)		3	1	2	2								2
induced pluripotent stem cell		9
Posterior foregut	5								1
Pancreatic progenitors (progenitor cell of endocrine pancreas)			5
chondrocyte			5
endocrine cell	3	2
posterior foregut	3	2
Hepatic endoderm	4
immature adipocyte		2	2
lymphocyte of B lineage (iPSC)		1		1	1
pancreatic PP cell	3
osteoblast			1					1
preadipocyte		1	1
Progenitor cell of Hypothalamus (neural progenitor cell)			1
cardiac fibroblast		1
endothelial cell		1
hematopoietic multipotent progenitor cell		1
intermediate cardiomyocytes		1
intermediate endothelial cell		1
intermediate smooth muscle cell		1
islet precursor cell		1
mesodermal cell (lineage marker-negative)		1
mesodermal cell (pacemaker intermediate)		1
neuron cell of Hypothalamus (neuron)			1
smooth muscle cell		1
stem cell		1
white fat cell				1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

Audit category:

Audit category:

1056 results