Experiment Matrix – Common Metabolic Diseases Genome Atlas

Experiment Matrix

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BIOSAMPLE

	ASSAY
1282 results Clear Filters	ChIP-seq	total RNA-seq	single cell RNA-seq	ATAC-seq	snATAC-seq	WGBS	DNase-seq	GRO-seq	RRBS	FAIRE-seq	Hi-C	pCHi-C
cell line
HepG2	360	5				1					1
GM12878	60
tissue
islet of Langerhans	28	103		20			1			1
liver	67					1	2		1
body of pancreas	33			4		2	2
spleen	20			1		2	1
pancreas	16					2				1

primary cell
pancreatic alpha cell	13	25	12	13		6
Langerhans cell			34		27
pancreatic beta cell	13	11	12	10
pancreatic ductal cell	13	4	9	4
pancreatic acinar cell	8	4	9	5

in vitro differentiated cells
adipocyte	53						1
pancreatic endoderm	18	4						1
hepatocyte	15
definitive endodermal cell	8	2						1
primitive gut cell	8	2						1

stem cell
hESC	3							1