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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 92total RNA-seq
  • 85single cell RNA-seq
  • 49ATAC-seq
  • 48snATAC-seq
  • 47WGBS
Assay category
  • 177Transcription
  • 97DNA accessibility
  • 47DNA methylation
Date released
  • 134May, 2022
  • 76February, 2023
  • 59September, 2020
  • 45February, 2021
  • 7August, 2020
Available data
  • 169fastq
  • 153zippedFastqFolder
  • 10bigWig
  • 6tsv
Organism
  • 321Homo sapiens
Biosample type
  • 321primary cell
Organ
  • 149epithelium
  • 149pancreas
Project
  • 321HPAP
Genome assembly (visualization)
  • 10GRCh38
Lab
  • 3915AMP-T2D consortium
  • 343Kyle Gaulton, UCSD
  • 321Klaus Kaestner, Upenn
  • 142Katalin Susztak, Upenn
  • 40Karen Mohlke, UNC
  • 38Bing Ren, UCSD
  • 19Xin Sun, UCSD
  • 10Rohit N. Kulkarni, M.D., Ph.D.
  • 4Anna Gloyn, Oxford
  • 4Struan F.A. Grant, CHOP
  • 2Mark McCarthy, Oxford
  • 1Maike Sander, UCSD
  • 1Stephen Parker, UMich
Audit category:
  • 27audit script error
BIOSAMPLE
ASSAY

321 results

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total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
WGBS
primary cell
Langerhans cell8548
pancreatic alpha cell422931
pancreatic beta cell111616
exocrine cell39
pancreatic acinar cell4
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