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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
49
total RNA-seq
20
single cell RNA-seq
16
snATAC-seq
1
Hi-C
Assay category
93
DNA accessibility
69
Transcription
1
3D chromatin structure
Date released
128
August, 2021
19
April, 2020
14
May, 2023
2
March, 2019
Available data
64
bed narrowPeak
64
xls
57
txt
1
bam
1
bed broadPeak
1
fastq
1
hic
Organism
162
Homo sapiens
Biosample type
163
tissue
Organ
142
kidney
19
lung
2
pancreas
Project
144
AMP
19
LungMap
Genome assembly (visualization)
76
GRCh38
2
hg19
Lab
3912
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
163 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
75
49
11
6
1
lung
9
10
islet of Langerhans
2
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