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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
snATAC-seq
9
single cell RNA-seq
5
ATAC-seq
2
Capture-C
Assay category
15
DNA accessibility
9
Transcription
Date released
19
April, 2020
4
August, 2021
3
February, 2023
Available data
5
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
Organism
25
Homo sapiens
Biosample type
19
tissue
7
in vitro differentiated cells
Organ
19
lung
4
connective tissue
Project
19
LungMap
7
AMP
Genome assembly (visualization)
7
hg19
Lab
3912
AMP-T2D consortium
343
Kyle Gaulton, UCSD
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
26 results
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snATAC-seq
single cell RNA-seq
ATAC-seq
Capture-C
tissue
lung
10
9
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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