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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
245
ChIP-seq
182
total RNA-seq
34
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
245
DNA binding
182
Transcription
34
DNA accessibility
1
DNA methylation
Target of assay
200
histone
200
histone modification
113
broad histone mark
87
narrow histone mark
23
control
22
transcription factor
9
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
368
bigWig
356
bam
198
bed narrowPeak
173
tsv
90
tagAlign
64
bigBed narrowPeak
2
bed bed3+
Organism
479
Homo sapiens
Biosample type
206
primary cell
132
in vitro differentiated cells
120
tissue
21
cell line
Organ
61
pancreas
60
heart
26
epithelium
23
kidney
2
connective tissue
2
embryo
1
bone element
1
bone marrow
1
thymus
Project
326
AMP
153
T1D
Genome assembly (visualization)
381
hg19
340
GRCh38
Lab
244
AMP-T2D consortium
235
Kyle Gaulton, UCSD
Audit category:
90
inconsistent ontology term
BIOSAMPLE
ASSAY
479 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
52
13
1
1
CD8-positive, alpha-beta T cell
33
2
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 11 more…
in vitro differentiated cells
cardiomyocytes
3
59
embryonic stem cell
37
5
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
+ See 10 more…
tissue
islet of Langerhans
36
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
+ See 4 more…
cell line
EndoC_BH1
1
4
16
See all biosamples
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