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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
22
total RNA-seq
4
ATAC-seq
Assay category
43
DNA binding
22
Transcription
4
DNA accessibility
Target of assay
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
11
transcription factor
8
control
2
RNA binding protein
1
chromatin remodeller
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
65
bam
56
bigWig
43
fastq
34
bed narrowPeak
22
tsv
14
bigBed narrowPeak
12
bed bed3+
4
bed bedgraph
Organism
69
Homo sapiens
Biosample type
593
tissue
96
cell line
69
in vitro differentiated cells
48
primary cell
3
stem cell
Organ
19
epithelium
15
liver
13
embryo
8
connective tissue
Project
69
AMP
Genome assembly (visualization)
64
hg19
60
GRCh38
Lab
69
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
9
inconsistent control read length
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
hepatocyte
15
pancreatic endoderm
9
adipocyte
4
4
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
Hepatic endoderm
4
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