Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 431ChIP-seq
  • 5total RNA-seq
Assay category
  • 431DNA binding
  • 5Transcription
Target of assay
  • 258transcription factor
  • 95histone
  • 95histone modification
  • 75control
  • 66recombinant protein
  • 54broad histone mark
  • 43RNA binding protein
  • 41narrow histone mark
  • 21chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 715February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 422bam
  • 360bigWig
  • 354fastq
  • 334bed narrowPeak
  • 333bigBed narrowPeak
  • 78tagAlign
  • 70bed broadPeak
  • 64bigBed broadPeak
  • 5tsv
  • 3tar
Organism
  • 436Homo sapiens
Biosample type
  • 338cell line
  • 89tissue
  • 9primary cell
Organ
  • 320liver
  • 91brain
  • 18blood
  • 18bodily fluid
  • 7spleen
  • 6epithelium
  • 6vasculature
  • 3blood vessel
Project
  • 436AMP
Genome assembly (visualization)
  • 307hg19
  • 306GRCh38
Lab
  • 436AMP-T2D consortium
Audit category:
  • 10missing controlled_by
Audit category:
  • 21inconsistent control read length
  • 4inconsistent control run_type
BIOSAMPLE
ASSAY

436 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG23155
GM1287818
tissue
layer of hippocampus22
caudate nucleus15
substantia nigra15
cingulate gyrus14
middle frontal area 4614
primary cell
astrocyte of the cerebellum3
brain microvascular endothelial cell3
choroid plexus epithelial cell3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego