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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 66ChIP-seq
  • 36DNase-seq
  • 8ATAC-seq
  • 7total RNA-seq
  • 4Hi-C
  • 1WGBS
Assay category
  • 66DNA binding
  • 44DNA accessibility
  • 7Transcription
  • 43D chromatin structure
  • 1DNA methylation
Target of assay
  • 49histone
  • 49histone modification
  • 34broad histone mark
  • 17control
  • 15narrow histone mark
Date released
  • 69October, 2019
  • 32June, 2019
  • 7May, 2019
  • 6February, 2021
  • 5July, 2019
  • 3February, 2020
Available data
  • 114bam
  • 92bed narrowPeak
  • 91bigWig
  • 84bigBed narrowPeak
  • 36bed bed3+
  • 36bed broadPeak
  • 36bigBed broadPeak
  • 7tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 122Homo sapiens
Biosample type
  • 122tissue
Organ
  • 946pancreas
  • 791liver
  • 684connective tissue
  • 524epithelium
  • 491adipose tissue
  • 393heart
  • 354kidney
  • 286brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 96musculature of body
  • 69blood
  • 69bodily fluid
  • 61eye
  • 43nerve
  • 37embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 122AMP
Genome assembly (visualization)
  • 96GRCh38
  • 96hg19
Lab
  • 122AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

122 results

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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve35215
tibial artery23211
muscle of leg7131
muscle of arm17
gastrocnemius medialis14
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