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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
Assay category
60
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
36
November, 2017
19
November, 2018
4
December, 2017
1
August, 2021
Available data
59
bam
59
fastq
58
bed narrowPeak
58
bigWig
57
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
1
tar
Organism
60
Homo sapiens
Biosample type
56
cell line
2
in vitro differentiated cells
2
tissue
Organ
60
liver
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
8
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
3
spleen
1
artery
1
eye
Project
60
AMP
Genome assembly (visualization)
57
hg19
53
GRCh38
Lab
59
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
cell line
HepG2
56
in vitro differentiated cells
hepatocyte
2
tissue
liver
1
right lobe of liver
1
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