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Schema
Citing CMDGA
Clear Filters
Annotation type
17
candidate regulatory elements
10
target gene predictions
8
chromatin state
3
accessible chromatin
2
gene expression
0
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
1
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
B cell
3
islet of Langerhans
2
CD8-positive, alpha-beta T cell
2
HepG2
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell of umbilical vein
2
erythroblast
2
extracellular matrix secreting cell
2
fibroblast of lung
2
foreskin fibroblast
2
gamma-delta T cell
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
monocyte
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
regulatory T cell
2
skeletal muscle myoblast
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
BE(2)-C
1
BJ cell
1
CD4-positive helper T cell
1
Caco-2 cell
1
DND-41 cell
1
ECC-1
1
GM06990
1
GM08714
1
GM10847
1
GM12801
1
GM12864
1
GM12865
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM15510
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
H1-hESC
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HEK293-T-REx cell
1
HFF-Myc
1
HGPS cell
1
HL-60
1
HeLa-S3
1
IMR-90
1
K562
1
MCF-7
1
MCF10A-Er-Src cell
1
NB4
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
PANC-1 cell
1
PFSK-1 cell
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SK-N-MC
1
SK-N-SH
1
SK-N-SH_RA
1
T cell
1
T-47D cell
1
U-87 MG
1
U2OS
1
WERI-Rb-1
1
WI-38 cell
1
aortic adventitial fibroblast
1
basal cell
1
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
ciliated cell
1
club cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
epithelial cell of proximal tubule
1
erythrocyte
1
esophageal epithelial cell
1
fibroblast
1
fibroblast of dermis
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
glioblastoma cell
1
immature natural killer cell
1
left renal cortex interstitium
1
macrophage
1
mammary epithelial cell
1
medulla oblongata
1
midbrain
1
myeloid dendritic cell
1
myofibroblast cell
1
myotube
1
neuroendocrine cell
1
osteoblast
1
pericyte cell
1
plasma cell
1
plasmacytoid dendritic cell
1
renal epithelial cell
1
retinal pigment epithelial cell
1
right kidney
1
right renal cortex interstitium
1
spinal cord
1
type I pneumocyte
1
type II pneumocyte
0
B-lymphocyte
Date released
2
May, 2020
1
April, 2020
Software used
macs
Lab
2
AMP-T2D consortium
1
Xin Sun, UCSD
Project
2
AMP
1
LungMap
RFA
2
AMP
1
LungMap2
software_used.software.name!
macs
Showing 3 of 3 results
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Download
FileSet
DSR608YQN
released
Annotation file set
: ATAC-seq peaks in B cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR086SNH
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR709UFN
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated B cell
Lab:
AMP-T2D consortium
Project:
AMP