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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
21
stomach
18
heart
17
lung
17
muscle of arm
15
kidney
15
large intestine
15
muscle of back
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
muscle of leg
14
small intestine
13
brain
13
left lung
12
placenta
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
spleen
9
thymus
8
CD4-positive, alpha-beta T cell
7
CD8-positive, alpha-beta T cell
7
foreskin keratinocyte
7
spinal cord
6
B cell
6
H9
6
heart left ventricle
6
liver
5
CD4-positive, alpha-beta memory T cell
5
cardiac muscle cell
5
foreskin fibroblast
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
CD14-positive monocyte
4
MCF-7
4
Peyer's patch
4
T-cell
4
WI38
4
body of pancreas
4
chorionic villus
4
dermis blood vessel endothelial cell
4
endothelial cell of umbilical vein
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neurosphere
4
ovary
4
peripheral blood mononuclear cell
4
right renal pelvis
4
testis
4
thyroid gland
4
transverse colon
4
trophoblast cell
4
upper lobe of left lung
3
A549
3
MCF 10A
3
T-helper 1 cell
3
breast epithelium
3
cardiac fibroblast
3
endocrine pancreas
3
esophagus muscularis mucosa
3
fibroblast of lung
3
foreskin melanocyte
3
heart right ventricle
3
layer of hippocampus
3
mammary epithelial cell
3
mesodermal cell
3
natural killer cell
3
omental fat pad
3
pancreas
3
parathyroid adenoma
3
psoas muscle
3
retina
3
right renal cortex interstitium
3
skeletal muscle tissue
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
2
22Rv1
2
AG10803
2
HEK293
2
HeLa-S3
2
LNCAP
2
NAMALWA
2
SK-N-DZ
2
SK-N-SH
2
T-helper 17 cell
2
T-helper 2 cell
2
adipocyte
2
angular gyrus
2
aorta
2
ascending aorta
2
bronchial epithelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
dermis microvascular lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
esophagus
2
eye
2
fibroblast of breast
2
lung microvascular endothelial cell
2
mesenchymal stem cell
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neural cell
2
neuroepithelial stem cell
2
neuronal stem cell
2
neutrophil
2
placental basal plate
2
prostate gland
2
regulatory T cell
2
skeletal muscle myoblast
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tongue
2
trophoblast
2
uterus
2
vagina
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
Ammon's horn
1
BE2C
1
BJ
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta memory T cell
1
CMK
1
Caco-2
1
Caki2
1
D721Med
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
G401
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12801
1
GM12864
1
GM12865
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM13976
1
GM13977
1
GM20000
1
GM23248
1
GM23338
1
H1
1
H4
1
H54
1
H7
1
HAP-1
1
HCEC 1CT
1
HCT116
1
HFF-Myc
1
HK-2
1
HL-60
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HUES48
1
HUES6
1
HUES64
1
HepG2
1
IMR-90
Organ
1
intestine
1
large intestine
Life stage
1
adult
Date released
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
September, 2022
Showing 1 of 1 results
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Download
FileSet
DSR731FHY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Caco-2
Lab:
AMP-T2D consortium
Project:
AMP