Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1669
candidate regulatory elements
1178
target gene predictions
977
histone modifications
939
chromatin state
864
accessible chromatin
811
binding sites
409
gene expression
162
eQTL
84
variant allelic effects
74
Fine-mapped variants
52
differential activity
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
2
Others
1
Genetic variant effects
Annotation type Category
1
ChIP-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
Pancreatic islets
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
1
adult
Date released
1
May, 2020
1
May, 2021
1
November, 2019
Software used
1
limix
1
macs
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR048FDK
released
Annotation file set
: Test annotation
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR942GKV
released
Annotation file set
: Annotation for gene TSS
Lab:
Kyle Gaulton, UCSD
Project:
AMP