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Citing CMDGA
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Annotation type
1669
candidate regulatory elements
1178
target gene predictions
977
histone modifications
939
chromatin state
864
accessible chromatin
811
binding sites
409
gene expression
162
eQTL
84
variant allelic effects
74
Fine-mapped variants
52
differential activity
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
3
quantitative proteomics
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
2
cartilage tissue
1
cerebrospinal fluid
Organ
2
connective tissue
1
bodily fluid
Life stage
3
adult
Date released
3
August, 2021
Software used
2
fastqtl
2
peer
1
r
Lab
2
ITG
1
AMP-T2D consortium
Project
2
community
1
AMP
RFA
2
community
1
AMP
Showing 3 of 3 results
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Download
FileSet
DSR561OLH
released
Annotation file set
: pQTLs from CSF levels of 1,126 proteins in 133 subjects by performing a genome-wide association analysis of 514,227 SNPs
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
community
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
community