Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
14
accessible chromatin
7
target gene predictions
3
gene expression
2
binding sites
2
caQTL
2
variant allelic effects
1
eQTL
1
histone modifications
Annotation Category
3
Gene expression levels
Annotation type Category
2
RNA-seq
1
snRNA-seq
Available data
2
tsv
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Biosample term
11
cardiomyocytes
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
EndoC_BH1
8
H1-hESC
7
kidney
7
neural progenitor cell
6
islet of Langerhans
5
pancreatic ductal cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
nephron progenitor
3
S-shaped body
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
endothelial cell
3
hepatocyte(AFP)
3
kidney interstitial cell
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
gamma-delta T cell
2
heart
2
leukocyte
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
monocyte
2
naive B cel
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic stellate cell
2
regulatory T cell
2
renal vesicle
2
skeletal muscle fiber
2
smooth muscle cell
1
B-1a B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
adipocyte
1
aorta
1
aortic valve
1
astrocyte
1
brain
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
central memory CD4-positive, alpha-beta T cell
1
cerebellum
1
diencephalon
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of distal tubule
1
excitatory neuron
1
frontal cortex
1
glial cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney epithelial cell
1
left cardiac atrium
1
liver
1
lower motor neuron
1
mesenchymal cell
1
mesenchymal stem cell
1
meso-epithelial cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
mitral valve
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neural cell
1
occipital lobe
1
osteoblast
1
pancreatic MUC5B+ductal cell
1
pancreatic alpha+beta cell
1
pancreatic cell
1
pancreatic cycling alpha cell
1
pancreatic endothelial cell
1
pancreatic gamma+epsilon cell
1
pancreatic macrophage cell
1
pancreatic mast cell
1
pancreatic polypeptide-secreting cell
1
parietal lobe
1
pericardium fibroblast
1
proximal tubule
1
pulmonary valve
1
renal connecting tubule
1
right cardiac atrium
1
skeletal muscle satellite cell
1
skeletal muscle tissue
1
stem cell
1
temporal lobe
1
tricuspid valve
1
type I muscle cell
1
type II muscle cell
1
ureteric bud
Organ
3
epithelium
Life stage
adult
1
fetal
Date released
1
February, 2021
1
February, 2024
1
May, 2021
Software used
3
r
1
deeptools
1
samtools
1
umitools
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
relevant_life_stage!
adult
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR669UJX
released
Annotation file set
: Gene expression annotation of endothelial cell_EC ISL1-PECAM1+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR946TAA
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of End from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP