Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
86
histone modifications
18
accessible chromatin
15
gene expression
4
eQTL
3
target gene predictions
2
hQTL
1
binding sites
1
meQTL
1
sQTL
Annotation Category
3
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
ChIP-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
1
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
56
HeLa-S3
41
H1-hESC
25
K562
21
A549
21
heart
21
stomach
19
CD14-positive monocyte
19
HFFc6
17
adrenal gland
17
brain
17
lung
17
small intestine
16
muscle of arm
16
placenta
15
kidney
15
thymus
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
11
hematopoietic multipotent progenitor cell
11
liver
11
right lung
10
B cell
10
GM12878
10
pericyte cell
10
pituitary stalk
10
right kidney
10
spinal cord
9
CD4-positive, alpha-beta memory T cell
9
MCF-7
9
adipose tissue
9
breast cancer cell
9
endothelial cell
9
keratinocyte
9
left kidney
9
neural progenitor cell
9
renal cortex interstitium
9
renal pelvis
9
spleen
8
H9
8
psoas muscle
7
CD8-positive, alpha-beta memory T cell
7
adipocyte
7
fibroblast cell line
7
foreskin fibroblast
7
heart left ventricle
7
lymphocyte
7
melanoma
7
mononuclear cell
7
sigmoid colon
7
trophoblast cell
6
HepG2
6
dendritic cell
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
fibroblast
6
fibroblast of lung
6
mammary gland epithelial cell
6
olfactory receptor cell
6
ovary
6
pancreas
6
smooth muscle cell
5
CD8-positive, alpha-beta T cell
5
HUES8
5
body of pancreas
5
cardiac muscle cell
5
fibroblast of cardiac tissue
5
fibroblast of dermis
5
foreskin keratinocyte
5
gastrocnemius medialis
5
heart right ventricle
5
hepatocyte
5
iPSC derived cell line
5
macrophage
5
mammary epithelial cell
5
mesenchymal stem cell
5
muscle of trunk
5
natural killer cell
5
osteoblast
5
pancreatic ductal cell
5
prostate cancer cell line
5
regulatory T cell
5
thyroid gland
5
transverse colon
4
CyT49
4
GM19238
4
GM19239
4
GM19240
4
IMR-90
4
Jurkat
4
SK-N-SH
4
T cell
4
aorta
4
astrocyte
4
bronchial epithelial cell
4
chorionic villus
4
colon epithelial cell
4
embryonic stem cell
4
endocrine pancreas
4
epithelial cell of prostate
4
erythroblast
4
glioblastoma multiforme cancer stem cell
4
layer of hippocampus
4
mesendoderm
4
monocyte
4
neuroblastoma cell
4
neuronal stem cell
4
pancreatic delta cell
4
prostate gland
4
retina
4
skeletal muscle myoblast
4
skin fibroblast
4
trophoblast
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
BJAB cell
3
CD4-positive, alpha-beta T cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12891
3
GM12892
3
GM18505
3
GM19099
3
GM19193
3
HAP-1
3
HCT-116 cell
3
HCT116
3
HEK293
3
HL-60
3
HT-29
3
KARPAS-422 cell
3
LoVo cell
3
MCF 10A cell
3
MM.1S
3
NAMALWA cell
3
NT2-D1 cell
3
OCI-LY7
3
PC-9
3
Peyer's patch
3
SK-N-MC
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
THP-1
3
Tumor-derived cell line
3
U937
3
WERI-Rb-1
3
acute myeloid leukemia
3
breast epithelium
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
chorion membrane
3
choroid plexus epithelial cell
3
coronary artery
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
endodermal cell
3
endometrium adenocarcinoma
3
esophagus
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
immortal human breast epithelial cell line cell
3
islet of Langerhans
3
liposarcoma
3
luminal epithelial cell of mammary gland
3
myotube
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
retinal pigment epithelial cell
3
synovial sarcoma cell
3
testis
3
tibial nerve
3
triple-negative breast cancer
3
upper lobe of left lung
2
A673
2
Ammon's horn
2
B-lymphoblastoid cell line
2
Brodmann (1909) area 46
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
Date released
1
February, 2021
1
January, 2021
1
May, 2020
1
May, 2021
Software used
1
abc
1
chicago
1
cicero
1
macs
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
1
Kyle Gaulton, UCSD
Project
3
AMP
1
T1D
RFA
3
AMP
1
T1D
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR431VOC
released
Annotation file set
: Binding sites annotation for Blood Monocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR303OXY
released
Annotation file set
: enhancer-gene predicton of THP-1_monocyte-VanBortle2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR158NKH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR499JJX
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of monocyte
Lab:
AMP-T2D consortium
Project:
AMP