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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
70
heart
67
kidney
65
stomach
57
brain
51
lung
51
muscle of arm
46
small intestine
45
adrenal gland
45
placenta
44
muscle of leg
43
islet of Langerhans
42
large intestine
41
muscle of back
39
left lung
39
liver
37
retina
34
right lung
34
thymus
32
right kidney
31
renal cortex interstitium
31
renal pelvis
27
heart left ventricle
27
left kidney
26
spleen
24
adipose tissue
23
spinal cord
22
tibial nerve
21
subcutaneous adipose tissue
20
pigmented layer of retina
19
body of pancreas
19
caudate nucleus
18
coronary artery
17
pancreas
17
right atrium auricular region
17
tibial artery
16
omental fat pad
16
sigmoid colon
16
substantia nigra
15
ovary
15
testis
14
ascending aorta
14
cerebellum
14
frontal cortex
14
heart right ventricle
14
putamen
14
thyroid gland
14
transverse colon
13
gastrocnemius medialis
13
layer of hippocampus
13
skeletal muscle tissue
13
upper lobe of left lung
12
chorionic villus
12
muscle of trunk
12
prostate gland
12
psoas muscle
12
temporal lobe
11
Peyer's patch
11
endocrine pancreas
11
left cardiac atrium
10
Ammon's horn
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
9
aorta
9
esophagus muscularis mucosa
9
esophagus squamous epithelium
9
right renal cortex interstitium
9
thoracic aorta
8
angular gyrus
8
breast epithelium
8
colonic mucosa
8
lower leg skin
8
right lobe of liver
8
trophoblast
8
vagina
7
amygdala
7
chorion membrane
7
cingulate gyrus
7
duodenal mucosa
7
esophagus
7
eye
7
globus pallidus
7
hypothalamus
7
midbrain
7
mucosa of rectum
7
nucleus accumbens
7
occipital lobe
7
parathyroid adenoma
7
stomach smooth muscle
7
tongue
7
uterus
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
gastroesophageal sphincter
6
limb
6
muscle layer of colon
6
muscle layer of duodenum
6
right cardiac atrium
6
subcutaneous abdominal adipose tissue
6
superior temporal gyrus
6
urinary bladder
5
C1 segment of cervical spinal cord
5
cartilage tissue
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
medulla oblongata
5
middle frontal gyrus
5
pons
5
skin of body
5
umbilical cord
4
Brodmann (1909) area 46
4
bone tissue
4
cerebellar cortex
4
cortex of kidney
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
germinal matrix
4
visceral abdominal adipose tissue
3
amnion
3
embryonic facial prominence
3
femur
3
inferior parietal cortex
3
mucosa of stomach
3
prefrontal cortex
3
rectum smooth muscle tissue
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
arm bone
2
blood
2
breast carcinoma
2
chorion
2
dorsolateral prefrontal cortex
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
forelimb muscle
2
germinal center
2
kidney epithelium
2
leg bone
2
mammary gland
2
middle frontal area 46
2
minor salivary gland
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pituitary gland
2
placental basal plate
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
bladder
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fetal heart
1
frontal pole
1
glomerular epithelium
Organ
1
epithelium
1
pancreas
Date released
1
February, 2024
Software used
1
macs
Lab
1
Kyle Gaulton, UCSD
Project
1
AMP
RFA
1
AMP
annotation_type!
target gene predictions
Showing 1 of 1 results
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Download
FileSet
DSR845NYB
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Delta
Lab:
Kyle Gaulton, UCSD
Project:
AMP